====== Related Projects ======
“... a highly valuable tool in helping to advance the research efforts undertaken here for the Visible CellTR project. It is a goal of the Visible CellTM project to map the output of Cell Illustrator onto a 3D physical model of the cell so that network models can be integrated and visualized ...” said Professor Mark Ragan, the University of Queensland \\ \\

Cell Illustrator can be used for:
    * Easy construction and visualization of biological pathways and processes
    * Simulation of systems that include both discrete and continuous processes
    * Estimation of unknown parameters in a pathway model using time-course information (Data Assimilation)
    * Simulation animation
    * Creating model diagrams of publication quality
    * Importing models from public or proprietary libraries and databases like KEGG
    * Creating pathway databases/libraries from a set of pathway models
    * Analysis and exploration of gene relationship networks

This is a list of projects that are related to Cell Illustrator. 
This list is not a comprehensive survey of these projects.
Feel free to contact us, if you have any comments regarding this page.

  * [[http://genome.ib.sci.yamaguchi-u.ac.jp/~pnp/|Petri Net Pathways]]
  * [[http://www.visiblecell.com/|Visible Cell project]]
  * [[http://macrophagedb.csml.org/|Curated Executable Macrophage Database]]
  * [[http://da.csml.org|Data Assimilation]]
  * [[http://www.csml.org|BioGraphLayout]]

Scientific publications that use Cell Illustrator are summarized [[publications|here]].